PhD

  • Allison Toltz

    Project Title: Proton therapy range verification with polymer gel and point detector array dosimetry

  • André Diamant Boustead

    Project Title: Modelling and Improving Lung Cancer treatment Outcomes Using Bayesian Network Averaging

  • Andrea Frezza

    Project Title: Une plateforme de planification des traitements en médecine nucléaire pour la thérapie radio-isotopique

  • Charles-Antoine Collins Fekete

    Project Title: Étude sur I’utilisation de CT multiple energie en proton et carbone therapie pour une meilleure delimitation de la tumeur et une augmentation de la definition du pouvoir d’arret massique

  • Daniel Maneval

    Project Title: Transport de protons par technique Monte Carlo sur processeur graphique

  • Devesh Bekah

    Project Title: Nanoparticle-enhanced Radiotherapy for Cancer Treatment

  • Dmitri Matenine

    Project Title: Reconstruction Itérative en Tomodensitométrie avec Correction des Projections par Simulation Monte Carlo.

  • Gabriel Famulari

    Project Title: Rotating shield high dose rate brachytherapy with Gd-153 and Yb-169 .

  • Haydee Maria Linares Rosales

    Project Title: Multi-Points Plastic Scintillation Detectors for In Vivo Dosimetry.

  • James Schneider

    Project Title: The decomposition of FDG-PET based differential uptake volume histograms in lung cancer patients

  • Jessica Perez

    Project Title: Molecular Imaging for Regenerative Medicine: Application in stem cell therapy for Radiation-Induced Lung Disease.

  • Joel Mullins

    Project Title: Dynamic trajectory optimization for volumetric modulated arc therapy

  • Judy Wang

    Project Title: Improvement of Monte Carlo (MC) electron transport at low energies for accurate modeling of cellular radiation damage

  • Lalageh Mirzakhanian

    Project Title: Small field dosimetry for GammaKnife

  • Logan Montgomery

    Project Title: Addressing the risk of secondary neutrons in radiotherapy through spectral measurements and track structure simulations .

  • Madison Rilling

    Project Title: Development of a three-dimensional scintillation dosimetry system for external beam radiotherapy.

  • Marc-André Renaud

    Project Title: Magnetic Resonance Imaging-based Dose Calculation and Verification for Four Dimensional Adaptive Radiotherapy.

  • Marie-Ève Delage

    Project Title: Quantum Dots as radiation nano-dosimeters/Caracterisation de la reponse des points quantiques CdSe soumis a la radiation ionisante

  • Martin Carrier-Vallières

    Project Title: Enhancement of texture-based metastasis prediction models via the optimization of PET/MR imaging acquisition protocols

  • Nguyen Peter Truong

    Project Title: Microdosimetrical and Radiobiological Comparison Between Different RadiationModalities in Radiation Therapy.

  • Ophelie Piron

    Project Title: EPID-based adaptive radiation therapy.

  • Peter Watson

    Project Title: Absolute dosimetry of a miniature x-ray source.

  • Philip Novosad

    Project Title: Exploiting Radio-Tracer Specific Atlases For Segmentation and PET Reconstruction

  • Reza Moosavi Askari

    Project Title: Therapeutic approaches.

  • Saad Aldelaijan

    Project Title: Advanced quality assurance methodologies in image-guided brachytherapy.

  • Songye Cui

    Project Title: Development of a Monte Carlo Platform for Dose Calculation and Dose Optimization in Brachytherapy using Graphic Processing Units

  • Stella Xing

    Project Title: Diffusion weighted magnetic resonance imaging of microstructures

  • Susannah Hickling

    Project Title: X-ray acoustic computed tomography for image-guided radiotherapy

  • Véronique Fortier

    Project Title: Quantitative susceptibility mapping with applications in cancer.

  • Yana Zlateva

    Project Title: Investigation of Cherenkov emission with applications in dosimetry and imaging in radiation therapy.

  • Yonas Mekuria

    Project Title: To be added.

  • Zaki Ahmed

    Project Title: Quantitative dynamic contrast enhanced MRI with reference region methods .

Devesh Bekah Abstract

The outcome of radiotherapy treatments can be improved by using nanoparticles to radiosensitize the tumor. Gold is commonly offered as a candidate but large amounts are usually necessary. One alternative is to use cerium-doped lanthanum fluoride (LaF3:Ce). These emit UV-visible light when irradiated. If these nanoparticles are conjugated to a photosentitizer, a combined radiation/ photodynamic therapy could be created. The main goals of this project will be first to synthesize, and characterize scintillating nanoparticles, then conjugate them to a photosensitizer such as chlorin e-6 and apply a radiation protocol to a variety of cell lines. The amount of cell death caused by equal concentrations of LaF3:Ce and Au will also be compared. Preliminary results using B16-F10 cells have shown that LaF3:Ce are not cytotoxic. Based on initial Monte Carlo (MC) simulations, there was significant dose enhancement observed with both Au and LaF3:Ce, with the highest achieved using 10 mg Au and a 50 kVp x-ray source. In preliminary radiation experiments, a dose enhancement factor of up to 1.35 was measured for the 160 kVp x-ray and 4 mg/ml LaF3:Ce nanoparticle concentration. Comparing the dose enhancement for 1mg/ml Au and LaF3:Ce showed no significant difference. The next step is to synthesize LaF3:Ce for stable in biological media. After quantifying cellular toxicity, radiation damage due to LaF3:Ce and Au will be compared. Simultaneously, more MC simulations of DNA strand breaks due to nanoparticle in solution will performed to provide a better correlation with experimental results.

Charles-Antoine Collins Fekete Abstract

Les CT à énergie multiple (MECT) ou à double-énergie (DECT) deviendront rapidement accessible dans les départements de physique des radiations. Ils peuvent potentiellement amener des améliorations majeures entre autre pour la délimitation des zones tumorales ainsi que pour augmenter la précision de mesure du pouvoir d’arrêt massique en proton thérapie et carbone thérapie. Les premières étapes de l’étude démontrent que l’utilisation de DECT réduit l’erreur sur le pouvoir d’arrêt massique de 3% à 1.0%. De plus, l’étude à aussi suggérer que l’utilisation en combinaison avec les CT en proton peut réduire cette erreur d’un facteur 5. Les CT en proton et en carbone sont développés maintenant en utilisant la connaissance des DECT pour augmenter la précision sur les pouvoirs d’arrêt massique.
Les MECT peuvent aussi avoir un rôle majeur à jouer dans la délimitation de la tumeur entre autre à cause de large variance entre les observateurs lorsqu’ils délimitent la tumeur. Cette variance peut être aussi large que 10-15% et peut mener à de très larges volumes tumoraux non-nécessaires dus à ces incertitudes. Le projet va investiguer l’utilisation de plusieurs images CT à énergie unique (30,40 et 50 keV) pour augmenter le contraste entre la tumeur et les organes autours ayant une densité approximativement équivalente. La majorité du projet sera fait en Monte Carlo et/ou avec les logiciels d’imageries du département de Radio-Oncologie et Radiologie du MGH.

Daniel Maneval Abstract

La protonthérapie devient une modalité de traitement de plus en plus accessible à travers le monde. Les calculs de dose les plus exacts en protonthérapie proviennent de techniques Monte Carlo, qui peuvent tenir compte des elements physiques fondamentaux (interactions, matériaux, géométrie). Or, ces calculs sont habituellemnt longs et par consequent difficilement utilisables dans un environnement Clinique. Ce projet propose d’adapter un code Monte Carlo existantm GPUMCD, au transport des protons. Ce code, qui s’exécute en parallèle sur processeurs graphiques, a permis d’accélérer significativement des calculs de doses impliquant photons et electrons. Son adaptation aux protons permet d’envisager une utilisation en clinique.

Dmitri Matenine Abstract

Le projet consiste en concevoir un algorithme de reconstruction novateur en tomodensitométrie, une modalité d’imagerie médicale volumétrique.Laproblématique est exposée en détail: le principal besoin est la correspondance la plus juste possible entre le sujet et l’image, alors que la principale contrainte est le temps de reconstruction de l’image. Une solution est proposée en se basant sur une revue de la littérature récente. La reconstruction peut être améliorée par l’utilisation d’un meilleur modèle physique de l’atténuation des rayons X, qui décrit l’évolution du spectre de la radiation et la diffusion. L’évolution du spectre est prise en charge par un étroprojecteur polychromatique, alors que la diffusion est caractérisée par simulation Monte Carlo. Des outils de calcul numériques de fine pointe, dont le matériel graphique, sont sollicités pour implémenter le modèle.

Andrea Frezza Abstract

Au CHU de Québec, des traitements radio-isotopiques avec L-177-octréotate sont réalisés pour certains patients atteints de tumeurs neuroendocrines. À ce jour, un quantité fixe d’activité est injectée pour chaque patient, sans égard à la captation du produit dans les volumes cibles et les organes à risque. Trois séances d’imagerie par tomographie d’émission
monophotonique (TEM) sont prévues à chaque cycle de traitement afin d’établir cette captation et éventuellement d’ajuster la dose selon les caractéristiques propres à chaque patient.
Version 1/ juin 2013: Le projet consiste à développer une plateforme de planification qui permettra le calcul de la dose associée à chaque cycle de traiement. Celle-ci permettra la
personnalisation des traitements et devrait mener à de meilleurs effets thérapeutiques tout en limitant les toxicités associées.

Joel Mullins Abstract

The objective of this work is to develop and implement trajectory-based radiotherapy in which the patient can be dynamically translated and/or rotated while radiation therapy is being delivered. The requisite calculation infrastructure for the optimization of trajectoryGbased treatments does not yet exist. Monte Carlo (MC) methods will be used to establish a beam model for different treatments (i.e. flattening filter free and regular treatment beams on the TrueBeam linear accelerator). From this work, MC calculated beamlets will be derived and inverse planned fluence pattern optimization will be applied to simple trajectories (i.e. synchronous circular motion of couch and gantry). Complex trajectories such as those that might be encountered in cranial stereotactic radiosurgery (SRS) will also be studied. In particular an efficient algorithm for the exploration of the parameter space that maps out permissible couch/gantry position combinations is required. An optimized trajectory will be calculated based on constraints imposed by radiobiological considerations (i.e. tumour control probability and normal tissue complication probability (NTCP)) as well as mechanical limitations of the linear accelerator (i.e. maximum permissible ranges of motion, travel speeds and a requirement for a “smooth” delivery). Finally, planning studies will be performed to evaluate the improvement in NTCP that could be expected based on improvements in dose conformity offered by both optimized trajectories and smaller projected MLC leaf widths using this treatment technique.

Saad Aldelaijan Abstract

The introduction of three dimensional (3D) imaging modalities into brachytherapy (BT) has facilitated the transition from 2D BT to 3D image-guided brachytherapy (IGBT). Namely, computed tomography (CT), magnetic resonance imaging (MRI) and ultrasonography (US) provided 3D anatomical image datasets enabling more accurate patient-specific delineation of target volumes and organs-at-risk, and dosimetric evaluation based on dose-volume relationships instead of point doses. This in turn allowed dose escalation to tumor volumes resulting in better clinical outcomes. Specific quality assurance (QA) procedures are well defined for the use of different anatomical imaging modalities (CT, MRI, US) in external beam radiotherapy (EBRT). Protocols and QA guidelines also exist for different kinds of BT treatments. However, the introduction of image-guidance into BT process should be associated with an update to current QA protocols taking into account different uncertainties that would affect clinical outcomes. Advanced QA methodologies that address this issue are required for the use of different machines (imaging and BT) at different phases of the treatment process. Favorably, radiochromic film (RCF) dosimetry offers a 2D high resolution solution that can be applied at different stages in the BT process. An RCF dosimetry system for BT was developed by our group and based on it, new methodologies will be investigated for clinical implementation .

Jessica Perez Abstract

Background and rationale
Among cancer patients undergoing radiation therapy, some will develop side effects. Radiation-induced lung disease (RILD) manifests in up to 30% of thoracic irradiations.
Stem cell therapy is currently under preclinical investigation for the treatment of RILD. Mesenchymal stem cells (MSC) have demonstrated great promise in regenerative medicine for multiple organs including the lungs.MSC have been shown to differentiate and exhibit an epithelial phenotype but more research is needed to understand and assess mechanisms of MSC differentiation. Molecular imaging has the potential to evaluate the ability of MSC for tissue repair function in vivo and non-invasively. In this work we will design and optimize imaging probes to track and monitor MSC differentiation in the context of lung regeneration after radiation-induced injury.
Objectives and research plan:
The lack of a reliable imaging tool to assess the behaviour of stem cells in the context of lung injury prompted us to design imaging probes capable of monitoring the dynamics of lung repair and differentiation.

1. Track stem cells in vivo with molecular imaging
Our lab is currently developing a rat model for RILD and cell therapy. We will use optical imaging methods to visualize and track MSC in vivo.

2. Develop a reporter gene construct to assess lung marker expression in differentiating cells
A reporter gene construct will be used to assess the expression of lung markers after differentiation induction. Promoters specific to lung epithelial cells will be used to drive the expression of a fluorescent reporter.

3. Design a biosensor to assess functional activity of differentiated cells
We will use the metabolic activity known to occur within the lung as a functional assessment of cell differentiation. The approach is to investigate cytochrome activity as basis of the design of a biosensor constructed with quantum dots nanoparticles.

4. Assess lung regeneration with microendoscopy.
With microendoscopy we are capable of non-invasively image lung status at the cellular level, in real time and this technique is also amenable to fluorescence endomicroscopy. We will therefore investigate the possibilities of using such a technique together with our imaging probes to assess MSC behaviour.

Ophelie Piron Abstract

For this project, we aim to use EPID images for daily monitoring of patient undergoing radiation therapy. We perform a relative analysis on these images totrack possible anatomical changes or other deviation from the planned treatment before they could have a significant impact on the outcome of the treatment. We are focusing our analysis on four anatomical sites: lung, head and neck, breast and prostate. For each site we can establish a set of threshold to trigger various actions from an additional CBCT acquisition to a full treatment replanning.

Marc-André Renaud Abstract

With the advent of combined MRIGLinac systems becoming a reality, we believe that establishing a work-flow for MRIG based dose calculation and verification will improve tumour localization, reduce radiation dose to patients from image acquisition, and improve the accuracy of dose delivery through the adaptive process. The aims of the project are as follows:

  1. Develop strategies to obtain local electron density for MR images through registration to pre-treatment CT, through fundamental models or with hybrid approaches.
  2. Adapt the existing CT-based planning workflow to MRI, including MR simulation, auto –contouring, digital radiography, treatment planning optimization and dose calculation.
  3. Adapt the existing CT-based delivery workflow to MRI, including treatment plan adaptations for changes in anatomy or tumour properties guided by repeated MRI image acquisitions during the course of treatment.

In order to achieve aim (1), we plan on first investigating a variety of algorithms for the accuracy of registration (rigid and deformable) between a pre-planning CT set and an MRI mset to transpose electron density values to our MRI data. We will also explore the option of MRI-only simulation with no CT registration using atlas-based techniques such as the one outlined by Dowling et al1, or hybrid techniques combining fundamental and empirical methods. For aim (2), with a strong emphasis on general-purpose computing on graphics processing units (GPGPU), we will evaluate the performance and accuracy of segmentation algorithms for organ contouring on MR images over CT images. For dose calculations and optimization, we plan on using a Macro Monte Carlo technique, based on the work of Jabbari, developed during the course of my Master’s thesis to produce ands optimal treatment plan guided by the MRI data set. Finally, for aim (3), we will validate the workflow by looking specifically at Head & Neck cancer cases, which are known to have significant anatomical changes during the course of their treatment.

Allison Toltz Abstract

Quantification of physical uncertainties in calculating the position of the Bragg peak is essential to the safe and effective use of proton therapy. To achieve our research objectives of establishing clinical methods to reduce range uncertainty for proton therapy, we propose two complementary methods of range verification: (1) polymer gel dosimeters analyzed with both optical computed tomography (OCT) and magnetic resonance imaging (MRI) to evaluate the three-dimensional dose distribution of a therapeutic proton delivery prior to treatment, and (2) in vivo point detector measurements to perform adaptive beam energy adjustments for pediatric patients receiving passively scattered proton craniospainal irradiation.

Experimental Approach: Particle simulation studies using the Tool for Particle Simulation (TOPAS)
platform will optimize positioning of the point detector in the patient, establish minimum requisite dose for positional accuracy, and quantify range-mixing uncertainty. A fabrication protocol for the polymer gels will be established and validated in photon and electron beams at our institution. A T2 sequencing protocol for a 3.0 T MRI scanner to image the gels will be optimized by working with our institution’s MR physicist and the Philips as well as an OCT scanning protocol as part of a research agreement with the Modus Medical Devices.

Impact: The point detector array system performs a final range verification measurement, allowing for an adaptive adjustment of the beam energy. For sites where an intracavitary measurement is
impractical, a polymer gel dosimetry protocol could provide three-dimensional range verification for patient-specific quality assurance.

Peter Watson Abstract

The INTRABEAM system (Carl Zeiss, Germany) is a miniature x-ray source for use in intraoperative radiotherapy and brachytherapy. Currently, this source is calibrated in a relative way using an indirect measurement of absorbed dose (energy per unit mass). The absolute primary standard for measuring absorbed dose from ionizing radiation is calorimetry, whereby dose is measured directly via temperature change of a medium. Thus, the ideal calibration technique for miniature x-ray sources would be calorimetry-based. The purpose of the project is to evaluate the current dosimetry formalism of the INTRABEAM system, and to develop a calorimetry-based absorbed dose protocol for these sources.
A monte carlo model of the INTRABEAM source has been developed and validated in-air using the EGSnrc particle transport code [1]. Using this model, ionization chamber correction and conversion factors can be accurately calculated for the INTRABEAM source, and compared with accepted values. Next, the feasibility of performing a calorimetric dose measurement with the INTRABEAM source will be investigated.
The time-dependent temperature gradients generated from the radiation dose nad source self-heating will be modeled using a finite-element solver (COMSOL). These thermal modeling results will be used to optimize the design of a water calorimeter specific for the INTREABEAM source. A prototype calorimeter will then be constructed, and characterized in terms of stability and noise. One characterized, dose measurements with the calorimeter will be performed and compared with ionization chamber and radiochromic film measurements.
The establishment of a calorimetry-based dose protocol for miniature x-ray sources, such as the INTREABEAM system, would help reduce dosimetric uncertainties. This increased confidence in delivered dose would allow for direct comparison between INTRABEAM and other existing commercial miniature x-ray devices. It would also assist with investigating the use of INTRABEAM at different cancer sites in the body and for combining INTRABEAM treatments with external beam radiotherapy. Most importantly, reducing the uncertainty of delivered dose will ultimately leads to improving the lives of patients.

Judy Wang Abstract

Monte Carlo (MC) simulations of radiation transport at low energies are of increasing importance for understanding radiation-induced damage of nanometer-scale cellular structures, such as the DNA (Nikjoo et al 2006,2008; Goodhead, 2006). Our approach will be todevelop detailed models of low-energy electron transport which are consistent with quantum theory. To first order we will follow the approach proposed by Liljequist, where quantum modeling is compared to classical track structure modeling in simplified systems. Research will entail the appropriate comparison metrics relevant for a specific end-point, e.g., DNA damage modeling versus damage in larger cellular structures. Classical track structure modeling largely only models elastic scattering. Therefore, a second topic of research will be to study the impact of inelastic scattering in track structure modeling. More realistic models of electron scattering in condensed media such as suggested by Caron and Sanche (2003) and Kaplan and Miterev (1985) will be applied to improve on existing approximate models of electron scattering in which water molecules are considered to be point scatterers and scattering is modeled as s-wave scattering. Finally, the new approach will be tested and validated against the established method.

Yana Zlateva Abstract

Purpose: To investigate from first principles, corroborated by Monte Carlo simulations and experimental measurements, the feasibility of developing a Cherenkov emission (CE) dosimetry protocol and in vivo imaging system for radiotherapy.

Methods: Monte Carlo (MC) simulations of 4-18 MeV electrons incident on water were carried out in Geant4. Percent depth Cherenkov emission (PDCE) and dose (PDD) were scored. Analytical PDD prediction models were derived from first principles and evaluated with our simulation data. Experimental techniques for validation of these models are examined. Experimental phantoms include water and tissue-simulating phantom composed of water, Intralipid®, and beef blood. The detector system comprises an optical fiber and diffraction-grating CCD spectrometer. A spectral shift to the NIR window of biological tissue was carried out with CdSe/ZnS quantum dots (QDs), emitting at (650±10) nm.

Results: The MC simulations showed that, for all energies in the drop-off region, PDD was non-linear with PDCE at the same depth and linear with PDCE when a constant depth shift is applied. The build-up region behaviour was not investigated. Based on these findings, two PDD prediction models – non-linear (same depth) and linear (depth shift) – were derived. The PDD prediction power of the non-linear method over all depths up to the practical range varied from < 2% with 4 MeV to < 0.5% with 18 MeV electrons. The PDD prediction power of the depth shift method ranged from 3% with 4 MeV to 1% with 18 MeV electrons at the inflection point, with a minimum from 2% to 0.1% slightly upstream. These errors correspond to < 0.1 mm. Due to the angular anisotropy of the Cherenkov signal, experimental validation of these methods would require 3D acquisition or the use of an isotropically emitting fluorophore. CE by an 18-MeV beam was effectively NIR-shifted in water and a tissue-simulating phantom, exhibiting a signal increase at 650 nm for QD depths up to 20 mm in the latter.

Conclusion: We present robust quantitative prediction models, derived from first-principles and supported by simulation and measurement, for relative dose from Cherenkov emission by high-energy electrons and we demonstrate the use of QDs to improve CE detectability in tissue. This constitutes a major step towards development of protocols for routine clinical quality assurance as well as real-time in vivo Cherenkov dosimetry and imaging in radiotherapy.

Martin Carrier-Vallières Abstract

In our ongoing work, we have shown that texture analysis of combined FDG-PET/MR information has the potential to predict the risk of metastases to the lungs in soft-tissue sarcomas (STS), an aggressive type of cancer with high metastatic potential that develops in connective tissues of the body. However, recent studies demonstrate that acquisition mode (acquisition time, 2D or 3D acquisition) and reconstruction parameter (algorithm, iterations, filters) variations in FDG-PET imaging, and pulse sequence and acquisition parameter (e.g., TR, TE, flip angle) variations in MRI affect the expected discriminating power of the texture analysis. Therefore, our working hypothesis is that the optimization of FDG-PET and MRI protocols will further improve the discriminating power of the combined PET/MRI texture features for the prediction of lung metastases in STS cancer.

The methodology of the project is as follows. Digital tumor models will be constructed from FDG-PET and MRI clinical imaging datasets of 30 STS tumors. Guidelines from the literature will be followed in order to build the FDG-PET and MRI digital tumor models from clinical data. In collaboration with the Montreal Neurological Institute, we will develop more complex algorithms to preserve the (texture) heterogeneity characteristics of FDG-PET and MRI tumors in the models. Finally, digital tumor models will be incorporated into digital human anthropomorphic phantoms from the XCAT series and an in-house PET/MRI simulation platform will be used to optimize FDG-PET and MRI image acquisition protocols to produce images with the optimal representation of textural features necessary to improve lung metastases prediction in STS cancer. Overall, this multidisciplinary endeavour could potentially impact the personalization of cancer treatments and hence improve patients’ outcomes.

Susannah Hickling Abstract

Radiation therapy is an important tool used in cancer treatment, with the goal being to deliver a sufficient amount of ionizing radiation dose to eradicate the tumor while minimizing the dose imparted to healthy tissue. Due to changes in tumor characteristics over the course of treatment, it is important to monitor tumor shape and properties to ensure optimal treatment effectiveness and safety. The use of image guided technology would be invaluable in providing real time information regarding the dose distribution and corresponding anatomy, however such a system is not presently available. The goal of this project is to investigate the use of x-ray acoustic computed tomography (XACT) for this purpose. XACT images the dose distribution following a pulse of irradiation by detecting radiation-induced acoustic waves. The first goal of the present work is to build upon the existing XACT simulation workflow developed at McGill to improve its accuracy, and properly validate it with experimental measurements. The second objective is to develop an experimental XACT-ultrasound system capable of concurrently imaging both the dose distribution and anatomy. Thirdly, phantoms representing different cancer sites, such as the prostate and breast, will be used to test the experimental system. Comparisons to simulations will be made. Finally, this system will be tested on animals.

Marie-Ève Delage Abstract

Les CT à énergie multiple (MECT) ou à double-énergie (DECT) deviendront rapidement accessible dans les départements de physique des radiations. Ils peuvent potentiellement amener des améliorations majeures entre autre pour la délimitation des zones tumorales ainsi que pour augmenter la précision de mesure du pouvoir d’arrêt massique en proton thérapie et carbone thérapie. Les premières étapes de l’étude démontrent que l’utilisation de DECT réduit l’erreur sur le pouvoir d’arrêt massique de 3% à 1.0%. De plus, l’étude à aussi suggérer que l’utilisation en combinaison avec les CT en proton peut réduire cette erreur d’un facteur 5. Les CT en proton et en carbone sont développés maintenant en utilisant la connaissance des DECT pour augmenter la précision sur les pouvoirs d’arrêt massique.
Les MECT peuvent aussi avoir un rôle majeur à jouer dans la délimitation de la tumeur entre autre à cause de large variance entre les observateurs lorsqu’ils délimitent la tumeur. Cette variance peut être aussi large que 10-15% et peut mener à de très larges volumes tumoraux non-nécessaires dus à ces incertitudes. Le projet va investiguer l’utilisation de plusieurs images CT à énergie unique (30,40 et 50 keV) pour augmenter le contraste entre la tumeur et les organes autours ayant une densité approximativement équivalente. La majorité du projet sera fait en Monte Carlo et/ou avec les logiciels d’imageries du département de Radio-Oncologie et Radiologie du MGH.

Philip Novosad Abstract

High quality radio-tracer specific atlases can be made using state-of-the-art diffeomorphic registration algorithms. The atlases can be exploited in a number of ways. Firstly, a careful manual segmentation of the atlas into relevant functional regions of interest can be used to enable fully automated segmentation and regional kinetic analysis of dynamic PET images. This prospect has been explored using real and simulated [11C]raclopride data. Secondly, a high quality atlas can be used to improve PET reconstruction by incorporating it as a prior into Bayesian PET reconstruction using an information-theoretic (joint entropy) measure. This latter application will be explored in further detail using a comprehensive simulated data set of [11C] raclopride images.

Haydee Maria Linares Rosales Abstract

Brachytherapy allows for the delivery of large dose of radiation in a reduced number of fractions. Trials that further increase the dose to 1x19Gy as a monotherapy treatment for prostate are about to start. While not always delivery such large fraction, brachytherapy is often associated to a smaller numbers of larger dose compared to EBRT, which can extend of weeks. Thus any differences between the planned and delivered doses will have a large clinical impact. In vivo dosimetry is the only method to quantify the delivered dose. Our group has developed a world-renowned expertise is developing plastic scintillation dosimeter (PSD) and a commercial product (Exradin W1) steaming from that research is now available to EBRT dose measurements. More recently, we have proposed a new hyperspectral technology that allows us to have multiple plastic scintillating elements (mPSDs) on a single clear light collecting fiber. In this project, a database of spectrum and other properties will be built from the characteristics of known commercially available plastic scintillators, as well as crystalline scintillators in term of emission wavelength and emission efficiency. This should allow full numerical modeling of combinations of two, three or more mPSDs apparatus. To extend the number of viable options, the possibility of adding wavelength filters to scintillators to modify the spectra seen at the photodetector level will further be explored. This should provide us with the best potential mPSDs candidates to be built and tested experimentally. The accuracy of this process will also need to be assessed.

Songye Cui Abstract

The introduction of advanced model-based dose calculation algorithms (MBDC) in BT will have profound and lasting consequences on current clinical practice. These codes allows medical physicists to visualize the effect of accurate dose calculation relative to TG43, but they are usually far from easy to operate and generally slow which limits their use for treatment optimization. Even when such algorithms are available, the treatment plan optimization is performed using the much faster TG43 protocol. We believe that unless fundamental research and developments are undertaken, these novel algorithms will only allow visualizing the dosimetry errors induced by TG43 but will not allow taking any actions during treatment plan optimization.
Current state-of-the-art MC codes while fast (20 to 60 seconds per calculation for low energy seed implants only) are tools to be used in dose optimization tasks. The only commercial MBDC algorithm can take up to 10 minutes to complete a dose calculation for a complex case of high energy 182Ir BT. Thus at this time no MBDC algorithms can be used to accomplish the necessary number of iterations needed by modern inverse planning algorithms within a reasonable time span (a few minutes maximum). A paradigm shift is needed and we are proposing migrating to GPU.
The proposed PhD project will tackle this shortcoming by the development and the validation of a fast and accurate graphic processing unit (GPU, which are massively parallel processors used in the video game industry) Monte Carlo dose calculation algorithm and GPU-based inverse planning algorithm.

Stella Xing Abstract

Diffusion weighted magnetic resonance imaging (DW-MRI) is widely used for neural and oncological diagnosis and treatment evaluation. Recent development of advanced DW-MRI techniques such as AxCaliber and ActiveAx, enable the extraction of mean axonal diameter and axonal density in the human brain. The idea behind AxCaliber is that axons of different diameters will experience the switch between intra-axonal restricted diffusion to extra-axonal hindered diffusion at a different diffusion time (the time between diffusion encoding gradient pulses). By varying the diffusion time, thereby allowing water to diffuse for different amounts of time before signal collection, the estimation of the axonal diameter distribution is feasible. I believe that the samelogic applies to cancer cells. Intracellular water molecules have extensive interactions with cell membranes and intracellular compounds. Water may form 3D arrays in the presence of interfaces with charged materials such as organelle membranes or protein molecules, which hinders water motion to a greater extent compare to extracellular water molecules. By measuring diffusion over a range of different time periods, I propose that we can estimate the average cell diameters.The aim of my PhD project is to develop the technique for estimating cell diameters, to translate this technique to oncological imaging and to employ a model of water diffusion within cancer cells to estimate their diameter distribution within various sub-regions of a tumor. I will start by scanning tumor samples ex vivo, obtained with the help of clinical collaborators via tissue biopsy from an ongoing study of soft tissue sarcoma. I will also perform analysis of the cell diameter distribution of the same histology sample with optical microscopy to validate my measurements from DW-MRI. Lastly, I will conduct Monte-Carlo simulations of water diffusion to strengthen our understanding of water diffusion in the tumor microenvironment.

Lalageh Mirzakhanian Abstract

TBA.

Charles-Antoine Collins Fekete Publications

1. Collins-Fekete C-A, Plamondon M, Martin A-G, Vigneault É, Verhaegen F, Beaulieu L. (2014) Quantifying the effect of seed orientation in postplanning dosimetry of low-dose-rate prostate brachytherapy, Med. Phys. 41, 101704.
2. Collins-Fekete C-A, Plamondon M, Martin A-G, Vigneault É, Verhaegen F, Beaulieu L. (2015) Calcifications in low-dose rate prostate seed brachytherapy treatment: post-planning dosimetry and predictive factors, Radiotherapy Oncology. 114(3):339-44.
3. Collins-Fekete C-A, Dias M.F., Doolan P., Beaulieu L., Seco J. (2015) Developing a phenomenological model of the proton trajectory within a heterogeneous medium required for proton imaging, Physics in Medicine and Biology 60(13): 5071-5082.

Philip Novosad Publications

1. P. Novosad, M. Beith, P. Gravel, H. Lombaert, K. Sieeiqi, A. Reader (2013), Applying a [11C]raclopride template to automated binding potential estimation in HRRT brain PET, Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC), 2013 IEEE (2013): 1-8.

Devesh Bekah Publications

1. D.R. Cooper, D. Bekah, J.L. Nadeau, (2014) Gold Nanoparticles and Their Alternatives for Radiation Therapy Enhancement, Frontiers in Chemistry 2, Article 86, 13 pages October 2014, doi: 10.3389/fchem.2014.00086.
2. Poon, W., Zhang, X., Bekah, D., Teodoro, J.G., Nadeau, J.L. (2015) Targeting B16 tumors in vivo with peptide-conjugated gold nanoparticles, Nanotechnology 26(8): 285101. Epub 2015 Jun 26.

Saad Aldelaijan Publications

1. To be added.

Marc-André Renaud Publications

1. M.A. Renaud, D. Roberge, J. Seuntjens (2015) Latent uncertainties of the pre-calculated track Monte Carlo method, Med. Phys. 42(1): 479.

Madison Rilling Abstract

Abstract: The overall goal of the project is to develop a three-dimensional (3D) radiation dose detector system using a uniform volume of plastic scintillator and a light-field imager for medical physics applications in radiotherapy.
This project builds on the proof of concept that was previously published for a 3D scintillation dosimetry system. As a phantom, the dosimeter uses a water-equivalent plastic scintillator volume, characterized by a fluorescent light yield linearly dependent of its locally absorbed dose. The delivered three-dimensional dose distribution is reconstructed by applying pixel-by-pixel tomographic algorithms to images acquired using a light-field imager; each image contains spatial and directional information of incident photons and thus consists of a multi-focal plane measurement of the scintillator’s light field. To our knowledge, the proposed 3D detector device is currently the only medical physics tool potentially capable of measuring complete three dimensional radiation doses in near real-time. However, more work is needed to improve its performance and make it a usable tool to perform quality assurance of external beam radiation treatments.
The main goal of this PhD project is to develop a second generation prototype with improved temporal and spatial resolutions. A collaboration with the Center for Optics, Photonics and Lasers’ Optical Engineering research group has been established to optimize and design a system meeting the specifications required for such an improvement. Overall, this doctoral project aims to offer very precise, fast and user friendly 3D dose measurements to the radiotherapy community, allowing for truly comprehensive verification and knowledge of delivered radiation dose.

Madison Rilling Publications

1. M. Goulet, M. Rilling, L. Gingras, S. Beddar, L. Beaulieu et L. Archambault, (2014) Novel, full 3D scintillation dosimetry using a static plenoptic camera, Med. Phys. 41(8) 082101-1-082101-13. Sylvia Fedrouk award, World Congress Toronto, June 7-12, 2015.

Zaki Ahmed Abstract

Abstract: Dynamic contrast enhanced (DCE) MRI provides information on blood supply in the body. This information is valuable in oncology since tumours are characterized by abnormal blood supply. Quantitative information, such as the rate of blood flow and cellular density, can be obtained by fitting DCE-MRI data to mathematical models. One such model is the reference region model (RRM) which is practical but suffers from a few limitations. Three major limitations will be explored in this project.

The first limitation of the RRM is that it does not account for the blood vessels which run through the tissue. These vessels are small and negligible in most healthy tissues, but tumours can have a high density of vessels. The first aim is to extend the RRM by including a fitting parameter that accounts for these blood vessels.
The second limitation is that the RRM provides values which can have high variability. The second aim is to reduce this variability by reducing the number of fitting parameters through a two-step approach.
The third limitation is that the RRM requires healthy tissue near the tumour to use as the reference region, but such a region is not always available. The third aim is to use parts of the tumour itself as a reference region.

The approaches developed in this project will be evaluated through simulations and will also be applied on soft tissue sarcoma data acquired from an on-going study at the RI-MUHC. .

Zaki Ahmed Publications

1) To Be Added

André Diamant Boustead Abstract

Bayesian network ensemble as a multivariate strategy to predict and improve lung radiotherapy outcomes
Among cancer victims, lung cancer accounts for the most fatalities in men and women worldwide
with a 5-year survival rate of only 15% showning no significant improvement over the past three
decades. There is a need to design robust predictors of an individual patient’s prognosis prior to treatment with the intent of improving said prognosis. Our group has shown that the use of a
systems-based approach which integrates dosimetric variables with relevant biomarkers extracted
from blood specimans allows an accurate prediction of treatment response. I propouse using a
probabilistic graphical model to intuitively depict and calculate the probability of tumour control or normal tissue complications after treatment. The model will then determine how the treatment plan maybe modified to optimize the prognosis. Ultimately the graphical model will be integrated into software to be used in clinics improving overall treatment success rates .

André Diamant Boustead Publications

1) To Be Added

Gabriel Famulari Abstract

To be added.

Gabriel Famulari Publications

1) To Be Added

James Schneider Abstract

A PET scan is performed by injecting a patient with a tracer which emits radiation that is collected and used to create a 30 image. The most common tracer is FOG, an analog for a sugar molecule. As the body’s cells consume sugar, an FOG-PET scan allows the mapping of sugar metabolism throughout the body, which has led to its widespread adoption in the study of cancer. Most cancers consume more sugar than healthy cells and so appear much brighter on a PET scan. In radiotherapy, imaging’s primary purpose is to define the gross tumour volume (GTV), the anatomical extent of disease. This is traditionally done with CT or MR imaging, which have excellent spatial resolution. Much effort has been spent determining how to redefine the GTV using PET to varied success. We believe that the biological information provided by PET should be used to complement and not compete with other modalities. Thus, our goal is to define and outline potential biological target volumes (BTVs) defined by metabolism. Our previous work investigating the abundance of these volumes in rectal cancer patients has demonstrated significant differences between patients with positive/negative responses to radiotherapy and we hope to compare, verify, and expand this for lung cancer patients. To this end, we are actively recruiting a retrospective cohort of 100 non-small cell lung cancer patients. To compare between patients, we will examine cancerous and healthy cells by taking a ratio of their signals in what we call signal-to-background ratio (SBR) images. We will then extract values found within the disease and plot the number of pixels corresponding to each SBR value. Afterwards, we define sub-volumes by determining the best fitting mathematical functions . By studying relationships between BTVs and patient outcome, we hope to advance radiotherapy treatment planning and evaluation .

James Schneider Publications

1) To Be Added

Véronique Fortier Abstract

The signal in magnetic resonance imaging (MRI) depends on different intrinsic tissue properties, such as water proton density, relaxation times, and magnetic susceptibility. Recent work has shown that magnetic susceptibility, which reflects the tissue magnetization in response to an applied magnetic field, can be used to reconstruct susceptibility map with a technique called quantitative susceptibility mapping (QSM). With its capacity to quantify the magnetic susceptibility of tissues, QSM can give important information about tissue structure, composition and oxygenation level. Susceptibility mapping is under ongoing development, but it has already shown to be a useful tool in neuroimaging for iron content measurement and estimation of venous oxygen saturation. Most of the work done with QSM has been done in the brain, but we would like to transfer this technique to other parts of the body, in particular to study healthy tissue (liver, breast, muscle) and to explore the value of QSM in cancer tumour characterization. This is gaining interest in the community due to the presence of structures with a magnetic susceptibility different from soft tissue, such as calcium and iron. The main challenges related to QSM outside of the brain include organ motion, the presence of additional phase shift to fat, and the presence of large susceptibility differences, which cause rapid signal decay .

Véronique Fortier Publications

1) To Be Added

Logan Montgomery Abstract

Neutrons are produced as an unwanted byproduct when generating high-energy photon radiation therapy beams, and deliver a potentially dangerous whole-body dose to radiotherapy patients. Secondary neutrons are also produced when generating proton beams, which are of greatest potential benefit for pediatric patients but for whom iatrogenic second cancer induction is of greatest concern. However, the carcinogenic risk due to neutron radiation is poorly understood and we currently rely on highly-uncertain radiation weighting factors published by the International Commission on Radiological Protection. These factors suggest that the radiobiological effectiveness (and thus carcinogenic risk) of neutrons varies significantly with neutron energy with a peak effectiveness around 1 MeV, but for largely unknown reasons.

This project aims to elucidate the energy-dependent mechanisms by which neutrons deposit dose in the macroscopic and nanoscopic regimes, and thus better inform carcinogenic risk estimates due to neutron irradiation received during radiation therapy. The method will consist of development of macroscopic Monte Carlo simulations to score energy fluence spectra of neutron radiation and secondary particles generated in water by the primary neutrons. These spectra will then be inserted into nanoscopic neutron track structure simulations using GEANT4-DNA to quantify the amount of DNA damage (i.e. strand breaks, chromosomal aberrations, etc.) caused by primary neutron radiation of various energies.

Primary neutron radiation energies will be selected in accordance with measured neturon spectra around clinical electron and proton accelerators, as well as neutron beam energies available via collaboration with Canadian Nuclear Laboratories (CNL). This will allow cross-verification of simulated results with radiobiological experiments performed in analogous irradiation conditions. .

Logan Montgomery Publications

1) To Be Added

Nguyen Peter Truong Abstract

The biological response to radiation, such as cell survival or DNA double-strand breaks (DSB), is quantified in terms of the relative biological effectiveness (RBE). This descriptor is used to measure the effectiveness of damage by various forms of ionizing radiation defined as the ratio of the dose from a reference radiation (250 kVp x-rays) to the dose of a studied source that achieves the same level of biological effect.
Due to the extensive approaches for radiation application in the clinical setting, there is a need to predict accurate RBE values as it plays an important function in the development of radiology-based treatment planning tools. Monte Carlo (MC) methods are accurate and rigorous tools for simulating radiation transport and score energy deposition in heterogeneous systems such as the human body. Since cellular response to radiation is affected by the microscopic distribution of energy deposition, MC track structure (MCTS) codes are implemented for investigations at the cellular and subcellular level.
Experimental studies implementing cell-culture models are needed to fill the biological gaps in our knowledge, and verify the simulation results. Brachytherapy Yb-169 and lr-192 sources and external beam radiation therapy will be investigated for the measurement of double-strand breaks and cell survival fraction. Three-dimensional (3D) cell-culture systems with the potential to more closely mimic in vivo conditions in an in vitro setting will be studied .

Nguyen Peter Truong Publications

1) To Be Added

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Reza Moosavi Askari Abstract

One of the therapeutic approaches that has attracted much of attention owing to its significant role in different types of widespread cancers, such as breast and prostate cancers, is brachytherapy. In that procedure, a high dose of radiation is applied to cancerous target tissue by positioning enclosed sources of radiations in the vicinity or inside of tumors without affecting the neighboring healthy tissues. Radionuclides such as 137Cs and 192Ir in the shape of seeds or wires are usually used as the brachytherapy sources. Precise knowledge of dose distribution around brachytherapy sources is essential to ameliorate the assessment of treatment quality and results. Achieving this goal has always been challenged by other effects such as
the influence of tissue heterogeneity and interseed attenuation. Monte Carlo (MC) particle transport methods can be used to provide us with an accurate understanding of dose distribution encompassing brachytherapy sources. Nevertheless, another challenge stems from overlapping of the radiation sources with the patient geometry. To overcome that, we use an object-oriented MC simulation toolkit, called GEANT4, which simulates the passage of particles throughout the matter and enable us to generate parallel geometries in a single application.GEANT4 will equip us with the whole range of functionality such as geometry characterization, navigator classes, tracking, and physical interaction models for a great range of particles with energies from 250 eV up to the TeV .

Reza Moosavi Askari Publications

1) To Be Added

Yonas Mekuria Abstract

To be added .

Yonas Mekuria Publications

1) To Be Added